AT2G31450.1 :

DomainDescriptionEvalueBitsGAStartEnd
HhH-GPDHhH-GPD superfamily base excision DNA repair protein1.9E-257821.90179306
HHH_5Helix-hairpin-helix domain0.14127.00190219
HHHHelix-hairpin-helix motif1.3E-123523.80244272
HHH_5Helix-hairpin-helix domain8.7E-061527.00254272
EndIII_4Fe-2SIron-sulfur binding domain of endonuclease III9.8E-061420.50340356

 379

HhH-GPD
HHH_5
HHH
HHH_5
EndIII_4Fe-2S


References:

HhH-GPD
10499592 The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites. Nature 1999;401:301-304.
10706276 Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA. Nature 2000;403:859-866.

HHH
8692686 The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA. Nucleic Acids Res 1996;24:2488-2497.
8832889 Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction. Science 1996;274:415-421.
12832627 An evolutionary analysis of the helix-hairpin-helix superfamily of DNA repair glycosylases. Mol Biol Evol 2003;20:1603-1611.
10908318 Common fold in helix-hairpin-helix proteins. Nucleic Acids Res 2000;28:2643-2650.
18439896 Structural biochemistry of a bacterial checkpoint protein reveals diadenylate cyclase activity regulated by DNA recombination intermediates. Mol Cell. 2008;30:167-178.

HHH_5

EndIII_4Fe-2S
7664751 Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure. EMBO J. 1995;14:4108-4120.
9045706 Cloning and expression of the cDNA encoding the human homologue of the DNA repair enzyme, Escherichia coli endonuclease III. J Biol Chem. 1997;272:6733-6740.
16096281 Engineering functional changes in Escherichia coli endonuclease III based on phylogenetic and structural analyses. J Biol Chem. 2005;280:34378-34384.
16967954 Direct electrochemistry of endonuclease III in the presence and absence of DNA. J Am Chem Soc. 2006;128:12082-12083.