c2pfam

AT2G31500.1 :

Domain Description Evalue Bits GA Start End
Pkinase Protein kinase domain 0 257 20.40 66 324
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 1.5E-31 100 23.10 68 320
APH Phosphotransferase enzyme family 0.029 4 22.40 91 154
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 2.5E-07 20 20.90 94 212
RIO1 RIO1 family 4.3E-05 13 20.40 104 201
Kinase-like Kinase-like 0.00013 11 25.00 162 308
APH Phosphotransferase enzyme family 0.00013 12 22.40 181 214
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00011 13 21.40 363 429
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0014 9 21.30 364 430
EF-hand_7 EF-hand domain pair 3.1E-12 37 30.00 372 430
EF-hand_5 EF hand 3.3E-07 20 25.90 372 394
EF-hand_1 EF hand 4.9E-10 29 25.40 373 398
EF-hand_6 EF-hand domain 1E-07 22 25.00 374 398
EF-hand_8 EF-hand domain pair 1.2E-05 15 28.00 375 397
EF-hand_9 EF-hand domain 7.3E-05 13 37.00 375 430
EF-hand_8 EF-hand domain pair 7.1E-13 38 28.00 384 431
EF-hand_1 EF hand 9.3E-07 18 25.40 407 431
EF-hand_5 EF hand 0.00018 11 25.90 412 431
EF-hand_6 EF-hand domain 0.0028 8 25.00 413 429
CCD48 Coiled-coil domain-containing protein 48 0.019 3 30.40 437 469
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.0049 7 21.40 440 503
EF-hand_8 EF-hand domain pair 0.0003 11 28.00 441 468
EF-hand_7 EF-hand domain pair 1.2E-14 45 30.00 442 508
EF-hand_5 EF hand 7.3E-08 22 25.90 444 465
EF-hand_6 EF-hand domain 1.6E-09 27 25.00 444 469
EF-hand_1 EF hand 6.4E-10 28 25.40 444 468
EF-hand_8 EF-hand domain pair 8.3E-08 22 28.00 462 508
CCD48 Coiled-coil domain-containing protein 48 0.0032 6 30.40 476 507
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0013 9 21.30 478 508
EF-hand_5 EF hand 2.9E-08 23 25.90 483 507
EF-hand_1 EF hand 1.5E-10 30 25.40 483 509
EF-hand_6 EF-hand domain 6.1E-07 19 25.00 483 509
EF-hand_9 EF-hand domain 0.21 2 37.00 484 508

582

Pkinase
PK_Tyr_Ser-Thr
APH
Kdo
RIO1
Kinase-like
APH
SPARC_Ca_bdg
EF-hand_4
EF-hand_7
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_8
EF-hand_1
EF-hand_5
EF-hand_6
CCD48
SPARC_Ca_bdg
EF-hand_8
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_8
CCD48
EF-hand_4
EF-hand_5
EF-hand_1
EF-hand_6
EF-hand_9

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

CCD48

Kinase-like

EF-hand_1

EF-hand_8

RIO1
12021457 Lipopolysaccharide phosphorylating enzymes encoded in the genomes of Gram-negative bacteria are related to the eukaryotic protein kinases. Protein Sci 2002;11:1580-1584.
12612080 Late cytoplasmic maturation of the small ribosomal subunit requires RIO proteins in Saccharomyces cerevisiae. Mol Cell Biol 2003;23:2083-2095.
12690111 Rio2p: An evolutionarily conserved, low-abundant protein kinase essential for processing of 20S Pre-rRNA in Saccharomyces cerevisiae. 0;0:0-0.
16008568 Structure and activity of the atypical serine kinase Rio1. FEBS J 2005;272:3698-3713.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Kdo
11069912 Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability. J Biol Chem 2001;276:5498-5504.
12021457 Lipopolysaccharide phosphorylating enzymes encoded in the genomes of Gram-negative bacteria are related to the eukaryotic protein kinases. Protein Sci 2002;11:1580-1584.
10531340 A Haemophilus influenzae gene that encodes a membrane bound 3-deoxy-D-manno-octulosonic acid (Kdo) kinase. Possible involvement of kdo phosphorylation in bacterial virulence. J Biol Chem 1999;274:31391-31400.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
Pkinase	Protein kinase domain	0	257	20.40	66	324
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	1.5E-31	100	23.10	68	320
APH	Phosphotransferase enzyme family	0.029	4	22.40	91	154
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	2.5E-07	20	20.90	94	212
RIO1	RIO1 family	4.3E-05	13	20.40	104	201
Kinase-like	Kinase-like	0.00013	11	25.00	162	308
APH	Phosphotransferase enzyme family	0.00013	12	22.40	181	214
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00011	13	21.40	363	429
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0014	9	21.30	364	430
EF-hand_7	EF-hand domain pair	3.1E-12	37	30.00	372	430
EF-hand_5	EF hand	3.3E-07	20	25.90	372	394
EF-hand_1	EF hand	4.9E-10	29	25.40	373	398
EF-hand_6	EF-hand domain	1E-07	22	25.00	374	398
EF-hand_8	EF-hand domain pair	1.2E-05	15	28.00	375	397
EF-hand_9	EF-hand domain	7.3E-05	13	37.00	375	430
EF-hand_8	EF-hand domain pair	7.1E-13	38	28.00	384	431
EF-hand_1	EF hand	9.3E-07	18	25.40	407	431
EF-hand_5	EF hand	0.00018	11	25.90	412	431
EF-hand_6	EF-hand domain	0.0028	8	25.00	413	429
CCD48	Coiled-coil domain-containing protein 48	0.019	3	30.40	437	469
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.0049	7	21.40	440	503
EF-hand_8	EF-hand domain pair	0.0003	11	28.00	441	468
EF-hand_7	EF-hand domain pair	1.2E-14	45	30.00	442	508
EF-hand_5	EF hand	7.3E-08	22	25.90	444	465
EF-hand_6	EF-hand domain	1.6E-09	27	25.00	444	469
EF-hand_1	EF hand	6.4E-10	28	25.40	444	468
EF-hand_8	EF-hand domain pair	8.3E-08	22	28.00	462	508
CCD48	Coiled-coil domain-containing protein 48	0.0032	6	30.40	476	507
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0013	9	21.30	478	508
EF-hand_5	EF hand	2.9E-08	23	25.90	483	507
EF-hand_1	EF hand	1.5E-10	30	25.40	483	509
EF-hand_6	EF-hand domain	6.1E-07	19	25.00	483	509
EF-hand_9	EF-hand domain	0.21	2	37.00	484	508