c2pfam

AT2G31510.1 :

Domain Description Evalue Bits GA Start End
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.8E-06 17 27.00 134 173
zf-RING_2 Ring finger domain 4.8E-07 20 27.30 136 177
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.3E-06 18 21.00 137 172
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.6E-07 21 27.00 137 167
zf-RING_5 zinc-RING finger domain 3.4E-07 20 27.90 137 166
zf-RING_UBOX RING-type zinc-finger 3.6E-06 16 25.20 137 163
IBR IBR domain 0.21 1 23.60 151 162
zf-FPG_IleRS Zinc finger found in FPG and IleRS 0.48 0 20.80 159 164
IBR IBR domain 0.25 1 23.60 179 193
IBR IBR domain 3E-19 58 23.60 206 268
zf-RING_2 Ring finger domain 0.026 4 27.30 246 262
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 0.53 0 27.00 247 262
zf-RING_5 zinc-RING finger domain 0.067 3 27.90 250 269
zf-RING_UBOX RING-type zinc-finger 0.0086 6 25.20 250 260
IBR IBR domain 3.5E-13 39 23.60 285 333
zf-RING_2 Ring finger domain 0.13 2 27.30 286 299
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 0.14 2 21.00 286 298
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 0.002 7 27.00 287 304
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 0.66 -1 27.00 289 298
zf-FPG_IleRS Zinc finger found in FPG and IleRS 3.3E-05 13 20.80 293 304
zf-RING_UBOX RING-type zinc-finger 0.02 4 25.20 295 331
zf-RING_5 zinc-RING finger domain 0.25 1 27.90 295 327
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 0.15 1 21.00 295 332
zf-RING_2 Ring finger domain 0.007 6 27.30 295 335
Rtt102p Rtt102p-like transcription regulator protein 0.00024 11 21.40 345 406

562

zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
IBR
zf-FPG_IleRS
IBR
IBR
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
IBR
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-FPG_IleRS
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
Rtt102p

References:

zf-FPG_IleRS

zf-C3HC4_3

zf-C3HC4_2

zf-RING_UBOX

IBR
10366851 A novel transactivation domain in parkin. Trends Biochem Sci 1999;24:229-231.
10422847 TRIADs: a new class of proteins with a novel cysteine-rich signature. Protein Sci 1999;8:1557-1561.
15152079 Parkin and relatives: the RBR family of ubiquitin ligases. Physiol Genomics 2004;17:253-263.
12446796 Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily. Mol Biol Evol 2002;19:2039-2050.

zf-RING_5

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

Rtt102p
14660704 Applicability of tandem affinity purification MudPIT to pathway proteomics in yeast. Mol Cell Proteomics. 2004;3:226-237.

zf-RING_2

Domain	Description	Evalue	Bits	GA	Start	End
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	1.8E-06	17	27.00	134	173
zf-RING_2	Ring finger domain	4.8E-07	20	27.30	136	177
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	1.3E-06	18	21.00	137	172
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	1.6E-07	21	27.00	137	167
zf-RING_5	zinc-RING finger domain	3.4E-07	20	27.90	137	166
zf-RING_UBOX	RING-type zinc-finger	3.6E-06	16	25.20	137	163
IBR	IBR domain	0.21	1	23.60	151	162
zf-FPG_IleRS	Zinc finger found in FPG and IleRS	0.48	0	20.80	159	164
IBR	IBR domain	0.25	1	23.60	179	193
IBR	IBR domain	3E-19	58	23.60	206	268
zf-RING_2	Ring finger domain	0.026	4	27.30	246	262
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	0.53	0	27.00	247	262
zf-RING_5	zinc-RING finger domain	0.067	3	27.90	250	269
zf-RING_UBOX	RING-type zinc-finger	0.0086	6	25.20	250	260
IBR	IBR domain	3.5E-13	39	23.60	285	333
zf-RING_2	Ring finger domain	0.13	2	27.30	286	299
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	0.14	2	21.00	286	298
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	0.002	7	27.00	287	304
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	0.66	-1	27.00	289	298
zf-FPG_IleRS	Zinc finger found in FPG and IleRS	3.3E-05	13	20.80	293	304
zf-RING_UBOX	RING-type zinc-finger	0.02	4	25.20	295	331
zf-RING_5	zinc-RING finger domain	0.25	1	27.90	295	327
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	0.15	1	21.00	295	332
zf-RING_2	Ring finger domain	0.007	6	27.30	295	335
Rtt102p	Rtt102p-like transcription regulator protein	0.00024	11	21.40	345	406