c2pfam

AT1G10580.1 :

Domain Description Evalue Bits GA Start End
RR_TM4-6 Ryanodine Receptor TM 4-6 0.0015 7 25.10 144 228
B12D B12D protein 0.00017 10 20.50 180 216
WD40 WD domain, G-beta repeat 7.2E-10 28 21.00 273 311
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.001 8 22.90 281 322
eIF2A Eukaryotic translation initiation factor eIF2A 0.00087 8 20.50 290 345
WD40 WD domain, G-beta repeat 1.1E-10 31 21.00 316 354
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 8.9E-06 15 22.90 325 373
eIF2A Eukaryotic translation initiation factor eIF2A 0.0031 6 20.50 325 438
PQQ_2 PQQ-like domain 0.095 1 27.60 337 365
WD40 WD domain, G-beta repeat 0.0073 6 21.00 379 398
PQQ_2 PQQ-like domain 6.3E-05 11 27.60 381 435
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.0064 6 22.90 382 421
WD40 WD domain, G-beta repeat 6.9E-07 19 21.00 403 439
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.011 5 22.90 454 485
WD40 WD domain, G-beta repeat 0.00067 9 21.00 460 482
WD40 WD domain, G-beta repeat 9.6E-06 15 21.00 495 530
eIF2A Eukaryotic translation initiation factor eIF2A 0.00018 10 20.50 502 557
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00015 11 22.90 507 546
WD40 WD domain, G-beta repeat 1.4E-05 15 21.00 536 573

573

RR_TM4-6
B12D
WD40
ANAPC4_WD40
eIF2A
WD40
ANAPC4_WD40
eIF2A
PQQ_2
WD40
PQQ_2
ANAPC4_WD40
WD40
ANAPC4_WD40
WD40
WD40
eIF2A
ANAPC4_WD40
WD40

References:

ANAPC4_WD40

PQQ_2

B12D
11473698 Stability of barley aleurone transcripts: Dependence on protein synthesis, influence of the starchy endosperm and destabilization by GA3. Physiol Plant 2001;112:403-413.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

eIF2A
12133843 Characterization of mammalian eIF2A and identification of the yeast homolog. J Biol Chem. 2002;277:37079-37087.

RR_TM4-6

Domain	Description	Evalue	Bits	GA	Start	End
RR_TM4-6	Ryanodine Receptor TM 4-6	0.0015	7	25.10	144	228
B12D	B12D protein	0.00017	10	20.50	180	216
WD40	WD domain, G-beta repeat	7.2E-10	28	21.00	273	311
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.001	8	22.90	281	322
eIF2A	Eukaryotic translation initiation factor eIF2A	0.00087	8	20.50	290	345
WD40	WD domain, G-beta repeat	1.1E-10	31	21.00	316	354
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	8.9E-06	15	22.90	325	373
eIF2A	Eukaryotic translation initiation factor eIF2A	0.0031	6	20.50	325	438
PQQ_2	PQQ-like domain	0.095	1	27.60	337	365
WD40	WD domain, G-beta repeat	0.0073	6	21.00	379	398
PQQ_2	PQQ-like domain	6.3E-05	11	27.60	381	435
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.0064	6	22.90	382	421
WD40	WD domain, G-beta repeat	6.9E-07	19	21.00	403	439
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.011	5	22.90	454	485
WD40	WD domain, G-beta repeat	0.00067	9	21.00	460	482
WD40	WD domain, G-beta repeat	9.6E-06	15	21.00	495	530
eIF2A	Eukaryotic translation initiation factor eIF2A	0.00018	10	20.50	502	557
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00015	11	22.90	507	546
WD40	WD domain, G-beta repeat	1.4E-05	15	21.00	536	573