c2pfam

AT2G32950.1 :

Domain Description Evalue Bits GA Start End
zf-RING_6 zf-RING of BARD1-type protein 0.00016 12 35.00 46 90
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.3E-10 31 27.00 49 93
zf-Nse Zinc-finger of the MIZ type in Nse subunit 0.0013 9 20.70 49 90
zf-RING_10 zinc RING finger of MSL2 0.00021 12 31.00 50 93
U-box U-box domain 2.2E-06 18 21.40 50 104
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.5E-10 31 21.00 52 89
Prok-RING_4 Prokaryotic RING finger family 4 0.00023 12 27.00 52 95
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 1.4E-13 41 27.00 52 89
zf-RING_5 zinc-RING finger domain 3.6E-07 21 27.90 52 91
zf-C3HC4_4 zinc finger of C3HC4-type, RING 1.5E-06 19 30.00 52 89
zf-RING_UBOX RING-type zinc-finger 1.6E-06 19 25.20 52 87
zf-RING_2 Ring finger domain 1.2E-08 26 27.30 52 89
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.009 7 21.40 52 94
zf-rbx1 RING-H2 zinc finger domain 0.00073 10 31.00 62 89
DUF1664 Protein of unknown function (DUF1664) 0.00022 12 30.00 127 201
Baculo_p24 Baculovirus P24 capsid protein 0.00098 9 21.30 161 201
Baculo_p24 Baculovirus P24 capsid protein 0.12 3 21.30 293 331
WD40 WD domain, G-beta repeat 0.0033 9 21.00 369 399
WD40_like WD40-like domain 0.19 1 40.00 404 472
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.023 6 22.90 419 465
WD40 WD domain, G-beta repeat 0.092 4 21.00 424 449
WD40 WD domain, G-beta repeat 4.7E-06 18 21.00 454 491
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.037 5 22.90 503 557
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.39 1 21.40 506 533
WD40 WD domain, G-beta repeat 0.001 10 21.00 508 534
WD40_like WD40-like domain 2.2E-10 31 40.00 517 623
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.039 5 22.90 519 590
WD40 WD domain, G-beta repeat 1.8E-08 26 21.00 540 576
WD40 WD domain, G-beta repeat 0.0096 7 21.00 582 615
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.0098 7 22.90 605 671
WD40 WD domain, G-beta repeat 0.056 5 21.00 647 670

675

zf-RING_6
zf-C3HC4_3
zf-Nse
zf-RING_10
U-box
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-ANAPC11
zf-rbx1
DUF1664
Baculo_p24
Baculo_p24
WD40
WD40_like
ANAPC4_WD40
WD40
WD40
ANAPC4_WD40
zf-ANAPC11
WD40
WD40_like
ANAPC4_WD40
WD40
WD40
ANAPC4_WD40
WD40

References:

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-C3HC4_2

Baculo_p24
11602755 Genome sequence of a baculovirus pathogenic for Culex nigripalpus. J Virol 2001;75:11157-11165.
8423444 Immunocytochemical characterization of p24, a baculovirus capsid-associated protein. J Gen Virol 1993;74:103-107.

WD40_like

zf-ANAPC11

zf-RING_UBOX

U-box
10704423 The U box is a modified RING finger - a common domain in ubiquitination. Curr Biol 2000;10:132-134.

zf-RING_6

zf-RING_5

DUF1664

zf-RING_2

zf-rbx1

zf-RING_10

zf-C3HC4_3

Prok-RING_4

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

ANAPC4_WD40

zf-C3HC4_4

Domain	Description	Evalue	Bits	GA	Start	End
zf-RING_6	zf-RING of BARD1-type protein	0.00016	12	35.00	46	90
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	2.3E-10	31	27.00	49	93
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	0.0013	9	20.70	49	90
zf-RING_10	zinc RING finger of MSL2	0.00021	12	31.00	50	93
U-box	U-box domain	2.2E-06	18	21.40	50	104
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	1.5E-10	31	21.00	52	89
Prok-RING_4	Prokaryotic RING finger family 4	0.00023	12	27.00	52	95
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	1.4E-13	41	27.00	52	89
zf-RING_5	zinc-RING finger domain	3.6E-07	21	27.90	52	91
zf-C3HC4_4	zinc finger of C3HC4-type, RING	1.5E-06	19	30.00	52	89
zf-RING_UBOX	RING-type zinc-finger	1.6E-06	19	25.20	52	87
zf-RING_2	Ring finger domain	1.2E-08	26	27.30	52	89
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.009	7	21.40	52	94
zf-rbx1	RING-H2 zinc finger domain	0.00073	10	31.00	62	89
DUF1664	Protein of unknown function (DUF1664)	0.00022	12	30.00	127	201
Baculo_p24	Baculovirus P24 capsid protein	0.00098	9	21.30	161	201
Baculo_p24	Baculovirus P24 capsid protein	0.12	3	21.30	293	331
WD40	WD domain, G-beta repeat	0.0033	9	21.00	369	399
WD40_like	WD40-like domain	0.19	1	40.00	404	472
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.023	6	22.90	419	465
WD40	WD domain, G-beta repeat	0.092	4	21.00	424	449
WD40	WD domain, G-beta repeat	4.7E-06	18	21.00	454	491
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.037	5	22.90	503	557
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.39	1	21.40	506	533
WD40	WD domain, G-beta repeat	0.001	10	21.00	508	534
WD40_like	WD40-like domain	2.2E-10	31	40.00	517	623
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.039	5	22.90	519	590
WD40	WD domain, G-beta repeat	1.8E-08	26	21.00	540	576
WD40	WD domain, G-beta repeat	0.0096	7	21.00	582	615
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.0098	7	22.90	605	671
WD40	WD domain, G-beta repeat	0.056	5	21.00	647	670