c2pfam

AT2G33510.1 :

Domain Description Evalue Bits GA Start End
Myc_N Myc amino-terminal region 1.5E-09 27 22.20 35 153
WW WW domain 3.1E-06 17 21.60 59 81
Na_trans_assoc Sodium ion transport-associated 2.8E-05 14 21.30 95 160
CDC45 CDC45-like protein 0.0054 4 26.70 100 145
Nop14 Nop14-like family 8.1E-05 10 34.90 108 146
TFIIE-A_C C-terminal general transcription factor TFIIE alpha 4.1E-07 20 21.10 111 158
CENP-B_dimeris Centromere protein B dimerisation domain 6.2E-06 16 21.80 117 168
Ribosomal_60s 60s Acidic ribosomal protein 0.0011 9 25.10 127 148
ADD_ATRX Cysteine Rich ADD domain 0.00048 9 25.70 149 167
ADD_ATRX Cysteine Rich ADD domain 0.031 4 25.70 170 183

189

Myc_N
WW
Na_trans_assoc
CDC45
Nop14
TFIIE-A_C
CENP-B_dimeris
Ribosomal_60s
ADD_ATRX
ADD_ATRX

References:

CENP-B_dimeris
14522975 Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution. J Biol Chem. 2003;278:51454-51461.

Ribosomal_60s
8722011 Proteins P1, P2, and P0, components of the eukaryotic ribosome stalk. New structural and functional aspects. Biochem Cell Biol 1995;73:959-968.

ADD_ATRX

TFIIE-A_C

WW
7846762 The WW domain: a signalling site in dystrophin? Trends Biochem Sci 1994;19:531-533.
8757138 Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide. Nature 1996;382:646-649.
11870222 Substrate proteolysis is inhibited by dominant-negative Nedd4 and Rsp5 mutants harboring alterations in WW domain 1. J Cell Sci 2002;115:1041-1048.
11323714 Solution structure of a Nedd4 WW domain-ENaC peptide complex. Nat Struct Biol 2001;8:407-412.
10932238 Converging on proline: the mechanism of WW domain peptide recognition. Nat Struct Biol 2000;7:611-613.
10744724 A novel pro-Arg motif recognized by WW domains. J Biol Chem 2000;275:10359-10369.
10037602 Function of WW domains as phosphoserine- or phosphothreonine-binding modules. Science 1999;283:1325-1328.
9407065 The WW domain of neural protein FE65 interacts with proline-rich motifs in Ermekova KS, Zambrano N, Linn H, Minopoli G, Gertler F, Russo T, Sudol M; J Biol Chem 1998;272:32869-32877.
8797792 Towards prediction of cognate complexes between the WW domain and proline-rich ligands. FEBS Lett 1996;384:1-8.
7644498 The WW domain of Yes-associated protein binds a proline-rich ligand that differs from the consensus established for Src homology 3-binding modules. Proc Natl Acad Sci U S A 1995;92:7819-7823.
7641887 Characterization of a novel protein-binding module--the WW domain. FEBS Lett 1995;369:67-71.

CDC45
9660782 The human homolog of Saccharomyces cerevisiae CDC45. J Biol Chem 1998;273:18205-18209.

Nop14
11694595 Novel stress-responsive genes EMG1 and NOP14 encode conserved, interacting proteins required for 40S ribosome biogenesis. Mol Biol Cell 2001;12:3644-3657.

Myc_N
9619443 The molecular role of Myc in growth and transformation: recent discoveries lead to new insights. FASEB J 1998;12:633-651.
9175477 Myc target genes. Trends Biochem Sci 1997;22:177-181.

Na_trans_assoc

Domain	Description	Evalue	Bits	GA	Start	End
Myc_N	Myc amino-terminal region	1.5E-09	27	22.20	35	153
WW	WW domain	3.1E-06	17	21.60	59	81
Na_trans_assoc	Sodium ion transport-associated	2.8E-05	14	21.30	95	160
CDC45	CDC45-like protein	0.0054	4	26.70	100	145
Nop14	Nop14-like family	8.1E-05	10	34.90	108	146
TFIIE-A_C	C-terminal general transcription factor TFIIE alpha	4.1E-07	20	21.10	111	158
CENP-B_dimeris	Centromere protein B dimerisation domain	6.2E-06	16	21.80	117	168
Ribosomal_60s	60s Acidic ribosomal protein	0.0011	9	25.10	127	148
ADD_ATRX	Cysteine Rich ADD domain	0.00048	9	25.70	149	167
ADD_ATRX	Cysteine Rich ADD domain	0.031	4	25.70	170	183